This page contains a list of applications installed to persistent storage and accessed via Docker containers. These can be run on the command line and Open OnDemand for those who want visualization using THPC.
Applications marked with an asterisk, while installed by RIS, are community-owned and may require separate licensing. Instructions for accessing these can be found in the Engineering Modules documentation.
To request an application not seen here, reach out to the RIS Service Desk.
A
Click to See Applications
abaqus *
Anaconda3
ant
at-spi2-atk
at-spi2-core
ATK
Autoconf
Automake
Autotools
B
Click to See Applications
binutils
Bison
BLIS
Boost
Brotli
bzip2
C
Click to See Applications
cadence *
cairo
CGAL
Clang
CMake
comsol *
Coot
cuda
CUDA
cuDNN
cURL
D
Click to See Applications
DB
Dbeaver
DBus
double-conversion
Doxygen
E
Click to See Applications
F
Click to See Applications
FFmpeg
ffnvcodec
FFTW
FFTW.MPI
Firefox
FLAC
flex
FlexiBLAS
FLTK
fontconfig
foss
freetype
FriBidi
FSL
fuse2
fuse3
FreeSurfer
G
Click to See Applications
gawk
GCC
GCCcore
GDAL
Gdk-Pixbuf
GDRCopy
GEOS
gettext
Ghostscript
git
GLib
GLPK
GMP
gnuplot
GObject-Introspection
gompi
googletest
gperf
graphite2
groff
GSL
GTK+
GTK2
gzip
H
Click to See Applications
HarfBuzz
HDF
HDF5
help2man
hwloc
hypothesis
I
Click to See Applications
ICU
IGV
iimpi
ImageMagick
imkl
imkl-FFTW
impi
InstantClient
intel
intel-compilers
intltool
J
Click to See Applications
K
Click to See Applications
L
Click to See Applications
LAME
libarchive
libcerf
libdeflate
libdrm
libepoxy
libevent
libfabric
libffi
libgd
libgeotiff
libgit2
libGLU
libglvnd
libiconv
libjpeg-turbo
libogg
libopus
libpciaccess
libpng
libsndfile
LibTIFF
libtirpc
libtool
libunwind
libvorbis
libxml2
libxslt
LittleCMS
LLVM
lmod
Lua
lz4
M
Click to See Applications
M4
make
makeinfo
Mako
MATLAB
Mesa
Meson
METIS
Miniconda3
mosh
MPFR
N
Click to See Applications
NASM
NCCL
ncurses
netCDF
nettle
Ninja
nlohmann_json
NLopt
nodejs
NSPR
NSS
numactl
O
Click to See Applications
OpenBLAS
OpenFOAM
OpenJPEG
OpenMPI
OpenSSL
P
Click to See Applications
Pango
parallel-tar
ParaView
PCRE
PCRE2
Perl
Perl-bundle-CPAN
pixman
pkg-config
pkgconf
PMIx
PostgreSQL
PROJ
pybind11
Python
Q
Click to See Applications
R
Click to See Applications
R
re2c
RELION
RStudio-Server
rsync
Ruby
Rust
S
Click to See Applications
SAMtools
SAS
ScaLAPACK
SciPy-bundle
SCOTCH
settarg
snappy
SOCI
SQLite
Stata
Szip
T
Click to See Applications
U
Click to See Applications
UCC
UCX
UCX-CUDA
UDUNITS
UnZip
util-linux
V
Click to See Applications
W
Click to See Applications
X
Click to See Applications
X11
x264
x265
xilinx *
xorg-macros
xprop
Xvfb
XZ
Y
Click to See Applications
Z
Click to See Applications