Matlab

Matlab In Labs

Matlab On Desktops/Laptops

Managed WUSTL Desktops

(how to get)

Personal Desktops and Laptops

Matlab in Clusters

Ondemand and Interactive Terminals

Begin 

Batch Submission

A sample Matlab batch job script (please see  (link to LSF) for more options):

#BSUB -o cpu_test.%J
#BSUB -R '(!gpu)'
#BSUB -N
#BSUB -J PythonJob
#BSUB -R "rusage[mem=32]"
#BSUB -n 8
#BSUB -R "span[hosts=1]"

module add matlab
matlab < compute.m > compute.out

The above script starts a Matlab job on a host with 8 cores and 32 GB of RAM free. As WUSTL is not licensed for Matlab's Distributed Computing module, we limit this job to a single host.

It is very important that you limit the number of cores Matlab uses in a job.

This can be done in your Matlab script like so, before any computations are complete:

% Limit cores with Parallel Computing Toolbox software:: 
mypool=parpool('local',str2num(getenv('LSB_DJOB_NUMPROC'))) 
% Limit Max Computational Threads, LASTN is a throwaway variable containing the previous setting
LASTN = maxNumCompThreads(str2num(getenv('LSB_DJOB_NUMPROC')))

Parallel Batch Submission

WUSTL is not licensed for the Matlab Distributed Computing module - Matlab jobs cannot span multiple hosts.